Published July 31, 2024
| Version 1.0
Text
Open
Text: Replication forks associated with long nuclear actin filaments in mild stress conditions display increased dynamics
- Creators
- Merigliano, Chiara1
- 1. Molecular and Computational Biology Department, University of Southern California, Los Angeles, United States
- Contact person:
- Chiolo, Irene1
- 1. Molecular and Computational Biology Department, University of Southern California, Los Angeles, United States
Description
Extended data script 1. This script enables automated pre-processing of focus positional data for MSD analyses. The input is an Excel file extracted from Imaris ('Detailed'.csv), and re-ordered by track ID. In this file, the positional data for each focus are shown for subsequent time points, and followed by the next focus. The script creates separate files, one for each focus, already formatted for MSD analyses, i.e. with time points starting from 001 in the first column and XYZ coordinates in the 3 subsequent columns. The resulting set of files is entered as is a previously published script for MSD calculation (Caridi et al. 2018b).
Files
Files
(2.7 kB)
Name | Size | Actions |
---|---|---|
md5:883f9d77f961ed6652035456590938d6
|
2.7 kB | Download |
Additional details
- Work in the Chiolo lab was supported by R01GM117376 and NSF Career 1751197. Work in the Lopes lab was supported by the SNF Project grant 310030_189206 and a grant from the Novartis Foundation. M.D.P. was supported by an AIRC "Fellowship for Abroad" and by the Forschungskredit of the University of Zurich.
- Accepted
-
2024-07-29