Published 2013 | Version v1
Dataset Open

Hylemonella + Bdellovibrio

Creators

  • 1. ROR icon California Institute of Technology

Description

Raw data files of Hylemonella + Bdellovibrio

Technical info

Tilt Series Date: 2013-01-03

Data Taken By: Yi-Wei Chang

Species / Specimen: Hylemonella gracilis

Strain: ATCC 19624

Tilt Series Settings: Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Ų, defocus: -10.0 μm, magnification: 27500x.

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: UCSFTomo

Purification / Growth Conditions / Treatment: Hylemonella grown 48 hr in Broth 233 at 26°C without antibiotics, Final OD600 < 0.1, incubated with attack-phase Bdellovibrio for 3 days, Spun down by 1000 rcf for 5 min and concentrated by ~10x for plunge freezing

Sample Preparation: Vitrobot setting: 100% humidity, 4 ul sample, 10 nm BSA treated gold, -3 offset, 4 s blot time, no drain, ethane/propane mix

ycw2013-01-03-6_slicer5883.jpg: chemoreceptor

Attached Files

Bdel_Hyle_0010007.mrc, Tilt Series (Pixel Size 0.4 nm), 3.4 GB

Bdel_Hyle_0010007_full.rec, Reconstruction (Pixel Size 1.6 nm), 441.7 MB

Files

keyimg_ycw2013-01-03-6.jpg

Files (3.9 GB)

Name Size
3.4 GB (external) Download
441.7 MB (external) Download
md5:169db861568a57f1e46b7ed6bb3c6a12
1.1 MB Preview Download
md5:7c1e48f72f62c2422904a2b3eb780910
17.9 MB Preview Download
md5:b0dfb9f0ba4272e53b8c7493155b4283
325.4 kB Preview Download

Additional details

Identifiers

DOI
10.22002/xtx3d-w1m43
TILT_SERIES_ID
ycw2013-01-03-6

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-01-03
Created
2013-01-03
Updated
2014-07-10