Published 2005 | Version v1
Dataset Open

Treponema primitia

Creators

  • 1. ROR icon California Institute of Technology

Description

Treponema primitia. The rest of the files are in ~/Images/050911ribosome exclusion zone, REZ

Technical info

Tilt Series Date: 2005-09-11

Data Taken By: Gavin Murphy

Species / Specimen: Treponema primitia

Strain: ZAS-2

Tilt Series Settings: Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 30.0 eV/Ų, defocus: -12.0 μm, magnification: 0x.

Microscope: 0

Acquisition Software: Undefined

Upload Method: rundir

Processing Software Used: imod, bsoft

Collaborators and Roles: Cells provided by Eric Matson, Jared Leadbetter; Data collected and processed by Gavin Murphy

Purification / Growth Conditions / Treatment: Cells grown in standard media around exponential growth. Removed from anaerobic tube with syringe. Uncentrifuged.

Sample Preparation: quantifoil grid, 10nm gold, 100% humidity...

T1_050911_tilt.jpg: * associated to rawdata T1_050911_rec.jpg: file associated to 3D Image #45 T1_050911_seg.jpg: file associated to 3D Image #45 gme2005-09-11-1_slicer5236.jpg: Pilli . REZ . Unknown gme2005-09-11-1_slicer9400.jpg: best example of a flagellar motor . Treponema primitia . snapshot by Megan gme2005-09-11-1_slicer9404.jpg: flagellar bundle in cytoplasm? . Treponema . snapshot by Megan gme2005-09-11-1_slicer9405.jpg: flagellar bundle in cytoplasm? . Treponema . snapshot by Megan

Attached Files

T1whole_S552G2_22.5kx13d130e.mrc.gz, Tilt Series (Pixel Size 0.98 nm), 836.5 MB

T1B2sPadRotSiz.mrc, Reconstruction (Pixel Size 0.0 nm), 243.1 MB

T1B2sBB_28_part.pif, Reconstruction (Pixel Size 0.0 nm), 352.3 kB

T1_050911_seg.tif, file associated to 3D Image #45, 697.9 kB

Files

gme2005-09-11-1_slicer5236.jpg

Files (1.1 GB)

Name Size
md5:a221af66e10612624045db75fd27e68e
150.0 kB Preview Download
md5:bcf53db972666b14e0af1c53bcb9f330
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md5:1bc14edd142601eee0f45c3d7e848c78
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md5:76d0350d8ec67b7fcbececd8b8a5169b
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md5:f912dd5ee4839f70603575dfd49d696f
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md5:24d161a38bdb57cf3db04f090c230b0a
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md5:fbbb9f7340d5161a8da0de045a1ea91a
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md5:a9c13a422e21011049d6c24965298936
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697.9 kB (external) Download
md5:c939ec2650dc22cadce5164528e25fa3
5.4 kB Preview Download
352.3 kB (external) Download
243.1 MB (external) Download
836.5 MB (external) Download

Additional details

Identifiers

DOI
10.22002/xtycv-54067
TILT_SERIES_ID
gme2005-09-11-1

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2005-09-11
Created
2008-06-30
Updated
2015-08-11