Caltech Tomography Archive
Published 2012 | Version v1
Dataset Open

Salmonella typhimurium

Beeby, Morgan1
  • 1. ROR icon California Institute of Technology

Description

Session notes: Salmonella minicells for fliL flagella, and T3SS. Auto-reconstructed to pixel size 5.18, then binned 2x further, low-pass filtered 0.33, 0.025; gold beads detected 24pix, erased 34pix. Tilt series notes: Tomogram notes:

Files

keyimg_mba2012-03-20-2.jpg
Files (4.6 MB)
Name Size
keymov_mba2012-03-20-2.mp4
md5:2ba9b219e51a17a2dd1d2416ea920e7e
4.3 MB Download
keyimg_mba2012-03-20-2.jpg
md5:505d423197133d7e2088bea6bad99fe1
192.2 kB Preview Download
mba2012-03-20-2_slicer5318.jpg
md5:9c0177582180992694d938b1e467c4aa
75.6 kB Preview Download

Technical info

Tilt Series Date: 2012-03-20

Data Taken By: Morgan Beeby

Species / Specimen: Salmonella typhimurium

Strain: serovar Typhimurium str. LT2

Tilt Series Settings: Single Axis, tilt range: (-66.0°, 66.0°), step: 1.5°, constant angular increment, dosage: 200.0 eV/Ų, defocus: 5.0 μm, magnification: 0x.

Acquisition Software: Leginon

Upload Method: rundir

Processing Software Used:

mba2012-03-20-2_slicer5318.jpg: Flagella

External Files

Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2012-03-20-2/rawdata/

12mar20b_fliL_0003.st, Tilt Series (Pixel Size 20.136 nm), 743.2 MB Download

12mar20b_fliL_0003.rec, Reconstruction (Pixel Size 1.036 nm), 38.7 MB Download

Additional details

Identifiers Funding Dates
Created:
June 16, 2023
Modified:
August 25, 2025