Published 2017 | Version v1
Dataset Open

Staphylococcus aureus_WT

  • 1. ROR icon California Institute of Technology

Description

S. aureus WT cells grown in TSB media.

Technical info

Tilt Series Date: 2017-07-21

Data Taken By: Debnath Ghosal

Species / Specimen: Staphylococcus aureus

Strain: subsp. aureus str. Newman

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 240.0 eV/Ų, defocus: -8.0 μm, magnification: 27500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Strain sent to us by Tracy Palmer, University of Dundee. Data collected by Debnath Ghosal.

Purification / Growth Conditions / Treatment: Cells were grown in TSA and in TSB (Oxoid TSA and TSB from Thermo Fisher 10525943 & 10137562). Dilute an overnight culture 1/100 and grow for ~4 hr (to OD 2) then freeze.

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 6 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.

Attached Files

Saureus_WT_201707210029.mrc, Tilt Series (Pixel Size 0.39 nm), 1.9 GB

Saureus_WT_201707210029_part67_13.rec, Reconstruction (Pixel Size 1.56 nm), 445.4 MB

Files

keyimg_dga2017-07-21-29.jpg

Files (2.4 GB)

Name Size
md5:7bbb68a161331974357eb9dfda2474f3
1.1 MB Preview Download
md5:a2446f71cfbfa0da67da240cb65f3c5e
12.7 MB Preview Download
1.9 GB (external) Download
445.4 MB (external) Download

Additional details

Identifiers

DOI
10.22002/y6p0m-cxq13
TILT_SERIES_ID
dga2017-07-21-29

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2017-07-21
Created
2017-08-02
Updated
2017-08-16