Published 2013 | Version v1
Dataset Open

H. pylori 26695 / Hs.746T

Creators

  • 1. ROR icon California Institute of Technology

Description

Grid box YWC057

Technical info

Tilt Series Date: 2013-12-16

Data Taken By: Yi-Wei Chang

Species / Specimen: Helicobacter pylori

Strain: 26695

Tilt Series Settings: Single Axis, tilt range: (-65.0°, 65.0°), step: 1.5°, constant angular increment, dosage: 180.0 eV/Ų, defocus: -10.0 μm, magnification: 22500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: H.pylori 26695 from ATCC, prepared by Lee Rettberg

Purification / Growth Conditions / Treatment: H.pylori cells grown in BLBB + 10% heat inactivated fetal bovine serum at 37 degrees in microaerobic chamber with GasPak EZ Campy Sachets for 2 days, OD600=0.4 Hs.746T cells cultivated on QF Au finder grid for 2 day in RPMI + 10% FBS. Infect by pylori for 3 hr.

Sample Preparation: Vitrobot settings: 100% humidity, 37 C, 3µl BSA treated 20 nm gold (0.8 ml gold resuspent in 30 ul RPMI+10% FBS). Manual blot by Whatman 40 filter paper. Ethane/propane mix.

ycw2013-12-16-40_slicer9904.jpg: Helicobacter pylori . Chemoreceptors

Attached Files

20131216_YWC057_10034.mrc, Tilt Series (Pixel Size 0.48 nm), 2.5 GB

20131216_YWC057_10034_part87_2.rec, Reconstruction (Pixel Size 1.92 nm), 712.7 MB

Files

keyimg_ycw2013-12-16-40.jpg

Files (3.2 GB)

Name Size
2.5 GB (external) Download
712.7 MB (external) Download
md5:45a628d8723561b36034c20310d64aa6
1.1 MB Preview Download
md5:b019a258ef6809a44af46548043f4276
29.8 MB Preview Download
md5:64332fad7d2f6314c1785b8f6f60a858
284.7 kB Preview Download

Additional details

Identifiers

DOI
10.22002/ynss8-7we30
TILT_SERIES_ID
ycw2013-12-16-40

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2013-12-16
Created
2013-12-17
Updated
2014-08-08