Published 2016 | Version v1
Dataset Open

Oil well Actinobacterium

Creators

  • 1. ROR icon California Institute of Technology

Description

Grid box YWC208

Technical info

Tilt Series Date: 2016-04-12

Data Taken By: Yi-Wei Chang

Species / Specimen: Unspecified

Strain: None

Tilt Series Settings: Single Axis, tilt range: (-50.0°, 50.0°), step: 2.0°, constant angular increment, dosage: 125.0 eV/Ų, defocus: -10.0 μm, magnification: 22500x.

Microscope: Caltech Polara

Acquisition Software: UCSFTomo

Upload Method: pipeline

Processing Software Used: Raptor

Collaborators and Roles: Fixed cells received from Meng Wang/ Xiao-Lei Wu Lab at Peking University, China

Purification / Growth Conditions / Treatment: Firstly wash cells using PBS for 3 times, then add proper volum of 2.5% glutaraldehyde followed 1 hour room temp incubation (done in Peking), then send to Caltech for freezing.

Sample Preparation: Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 4 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.

Attached Files

20160410_YWC210_20007.mrc, Tilt Series (Pixel Size 0.48 nm), 1.5 GB

20160410_YWC210_20007_full.rec, Reconstruction (Pixel Size 1.92 nm), 712.7 MB

Files

keyimg_ycw2016-04-12-6.jpg

Files (2.2 GB)

Name Size
1.5 GB (external) Download
712.7 MB (external) Download
md5:e835d8176ca03d0b6fec9b4d787b794b
1.0 MB Preview Download
md5:4da4c04a3b242bb903cac025051876fb
20.8 MB Preview Download

Additional details

Identifiers

DOI
10.22002/zrgtx-8rj68
TILT_SERIES_ID
ycw2016-04-12-6

Funding

NIH
HHMI
Beckman Institute
Gordon and Betty Moore Foundation
Agouron Institute
John Templeton Foundation

Dates

Collected
2016-04-12
Created
2016-04-12
Updated
2016-04-26