Schnitzcells is a MATLAB analysis package that enables quantitative analysis of fluorescence time-lapse movies. Schnitzcells.zip includes the code as well as a user's manual for running the software. TestSchnitzImgs.zip provides example data to test the analysis system. Tutorials.zip contains video tutorials illustrating how to use the code. ...

 Note that this version is old, new version can be found here: https://doi.org/10.22002/kn8yx-kmb24 In multicellular organisms, cell types must be produced and maintained in appropriate proportions. One way this is achieved is through committed progenitor cells that produce specific sets of descendant cell types. However, cell fate commitment is...

In multicellular organisms, cell types must be produced and maintained in appropriate proportions. One way this is achieved is through committed progenitor cells or extrinsic interactions that produce specific patterns of descendant cell types on lineage trees. However, cell fate commitment is probabilistic in most contexts, making it difficult ...

Data and code repository for paper "Periodic spatial patterning with a single morphogen"

Data and code repository for paper "Periodic spatial patterning with a single morphogen"

This deposit contains the raw and processed data and documents for the article, 'Combinatorial expression motifs in signaling pathways.' Code and analysis (organized by figure) are available at the GitHub repository https://github.com/nkanrar/motifs and Caltech DATA https://data.caltech.edu/records/bgm15-18g17. Please see the related publication...

This deposit contains the code and analysis for the manuscript, 'Combinatorial expression motifs in signaling pathways.' Data are available at the CaltechDATA repository https://. Please see the related publication for more details, and contact the corresponding authors for any questions.

Raw data for paper "Tuning methylation-dependent silencing dynamics by synthetic modulation of CpG density". Previously titled as "Promoter CpG content regulates DNMT-dependent silencing dynamics"

Source data for manuscript "Dynamics and functional roles of splicing factor autoregulation"

Flow data, images, and scripts required to generate figures.